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      Celebrating open data

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      The inaugural MIT Prize for Open Data, which included a $2,500 cash prize, was recently awarded to 10 individual and group research projects. Presented jointly by the School of Science and the MIT Libraries, the prize recognizes MIT-affiliated researchers who make their data openly accessible and reusable by others. The prize winners and 16 honorable mention recipients were honored at the Open Data @ MIT event held Oct. 28 at Hayden Library. 

      “By making data open, researchers create opportunities for novel uses of their data and for new insights to be gleaned,” says Chris Bourg, director of MIT Libraries. “Open data accelerates scholarly progress and discovery, advances equity in scholarly participation, and increases transparency, replicability, and trust in science.” 

      Recognizing shared values

      Spearheaded by Bourg and Rebecca Saxe, associate dean of the School of Science and John W. Jarve (1978) Professor of Brain and Cognitive Sciences, the MIT Prize for Open Data was launched to highlight the value of open data at MIT and to encourage the next generation of researchers. Nominations were solicited from across the Institute, with a focus on trainees: research technicians, undergraduate or graduate students, or postdocs.

      “By launching an MIT-wide prize and event, we aimed to create visibility for the scholars who create, use, and advocate for open data,” says Saxe. “Highlighting this research and creating opportunities for networking would also help open-data advocates across campus find each other.” 

      Recognizing researchers who share data was also one of the recommendations of the Ad Hoc Task Force on Open Access to MIT’s Research, which Bourg co-chaired with Hal Abelson, Class of 1922 Professor, Department of Electrical Engineering and Computer Science. An annual award was one of the strategies put forth by the task force to further the Institute’s mission to disseminate the fruits of its research and scholarship as widely as possible.

      Strong competition

      Winners and honorable mentions were chosen from more than 70 nominees, representing all five schools, the MIT Schwarzman College of Computing, and several research centers across MIT. A committee composed of faculty, staff, and a graduate student made the selections:

      Yunsie Chung, graduate student in the Department of Chemical Engineering, won for SolProp, the largest open-source dataset with temperature-dependent solubility values of organic compounds. 
      Matthew Groh, graduate student, MIT Media Lab, accepted on behalf of the team behind the Fitzpatrick 17k dataset, an open dataset consisting of nearly 17,000 images of skin disease alongside skin disease and skin tone annotations. 
      Tom Pollard, research scientist at the Institute for Medical Engineering and Science, accepted on behalf of the PhysioNet team. This data-sharing platform enables thousands of clinical and machine-learning research studies each year and allows researchers to share sensitive resources that would not be possible through typical data sharing platforms. 
      Joseph Replogle, graduate student with the Whitehead Institute for Biomedical Research, was recognized for the Genome-wide Perturb-seq dataset, the largest publicly available, single-cell transcriptional dataset collected to date. 
      Pedro Reynolds-Cuéllar, graduate student with the MIT Media Lab/Art, Culture, and Technology, and Diana Duarte, co-founder at Diversa, won for Retos, an open-data platform for detailed documentation and sharing of local innovations from under-resourced settings. 
      Maanas Sharma, an undergraduate student, led States of Emergency, a nationwide project analyzing and grading the responses of prison systems to Covid-19 using data scraped from public databases and manually collected data. 
      Djuna von Maydell, graduate student in the Department of Brain and Cognitive Sciences, created the first publicly available dataset of single-cell gene expression from postmortem human brain tissue of patients who are carriers of APOE4, the major Alzheimer’s disease risk gene. 
      Raechel Walker, graduate researcher in the MIT Media Lab, and her collaborators created a Data Activism Curriculum for high school students through the Mayor’s Summer Youth Employment Program in Cambridge, Massachusetts. Students learned how to use data science to recognize, mitigate, and advocate for people who are disproportionately impacted by systemic inequality. 
      Suyeol Yun, graduate student in the Department of Political Science, was recognized for DeepWTO, a project creating open data for use in legal natural language processing research using cases from the World Trade Organization. 
      Jonathan Zheng, graduate student in the Department of Chemical Engineering, won for an open IUPAC dataset for acid dissociation constants, or “pKas,” physicochemical properties that govern how acidic a chemical is in a solution.
      A full list of winners and honorable mentions is available on the Open Data @ MIT website.

      A campus-wide celebration

      Awards were presented at a celebratory event held in the Nexus in Hayden Library during International Open Access Week. School of Science Dean Nergis Mavalvala kicked off the program by describing the long and proud history of open scholarship at MIT, citing the Institute-wide faculty open access policy and the launch of the open-source digital repository DSpace. “When I was a graduate student, we were trying to figure out how to share our theses during the days of the nascent internet,” she said, “With DSpace, MIT was figuring it out for us.” 

      The centerpiece of the program was a series of five-minute presentations from the prize winners on their research. Presenters detailed the ways they created, used, or advocated for open data, and the value that openness brings to their respective fields. Winner Djuna von Maydell, a graduate student in Professor Li-Huei Tsai’s lab who studies the genetic causes of neurodegeneration, underscored why it is important to share data, particularly data obtained from postmortem human brains. 

      “This is data generated from human brains, so every data point stems from a living, breathing human being, who presumably made this donation in the hope that we would use it to advance knowledge and uncover truth,” von Maydell said. “To maximize the probability of that happening, we have to make it available to the scientific community.” 

      MIT community members who would like to learn more about making their research data open can consult MIT Libraries’ Data Services team.  More

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      Methane research takes on new urgency at MIT

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      One of the most notable climate change provisions in the 2022 Inflation Reduction Act is the first U.S. federal tax on a greenhouse gas (GHG). That the fee targets methane (CH4), rather than carbon dioxide (CO2), emissions is indicative of the urgency the scientific community has placed on reducing this short-lived but powerful gas. Methane persists in the air about 12 years — compared to more than 1,000 years for CO2 — yet it immediately causes about 120 times more warming upon release. The gas is responsible for at least a quarter of today’s gross warming. 

      “Methane has a disproportionate effect on near-term warming,” says Desiree Plata, the director of MIT Methane Network. “CH4 does more damage than CO2 no matter how long you run the clock. By removing methane, we could potentially avoid critical climate tipping points.” 

      Because GHGs have a runaway effect on climate, reductions made now will have a far greater impact than the same reductions made in the future. Cutting methane emissions will slow the thawing of permafrost, which could otherwise lead to massive methane releases, as well as reduce increasing emissions from wetlands.  

      “The goal of MIT Methane Network is to reduce methane emissions by 45 percent by 2030, which would save up to 0.5 degree C of warming by 2100,” says Plata, an associate professor of civil and environmental engineering at MIT and director of the Plata Lab. “When you consider that governments are trying for a 1.5-degree reduction of all GHGs by 2100, this is a big deal.” 

      Under normal concentrations, methane, like CO2, poses no health risks. Yet methane assists in the creation of high levels of ozone. In the lower atmosphere, ozone is a key component of air pollution, which leads to “higher rates of asthma and increased emergency room visits,” says Plata. 

      Methane-related projects at the Plata Lab include a filter made of zeolite — the same clay-like material used in cat litter — designed to convert methane into CO2 at dairy farms and coal mines. At first glance, the technology would appear to be a bit of a hard sell, since it converts one GHG into another. Yet the zeolite filter’s low carbon and dollar costs, combined with the disproportionate warming impact of methane, make it a potential game-changer.

      The sense of urgency about methane has been amplified by recent studies that show humans are generating far more methane emissions than previously estimated, and that the rates are rising rapidly. Exactly how much methane is in the air is uncertain. Current methods for measuring atmospheric methane, such as ground, drone, and satellite sensors, “are not readily abundant and do not always agree with each other,” says Plata.  

      The Plata Lab is collaborating with Tim Swager in the MIT Department of Chemistry to develop low-cost methane sensors. “We are developing chemiresisitive sensors that cost about a dollar that you could place near energy infrastructure to back-calculate where leaks are coming from,” says Plata.  

      The researchers are working on improving the accuracy of the sensors using machine learning techniques and are planning to integrate internet-of-things technology to transmit alerts. Plata and Swager are not alone in focusing on data collection: the Inflation Reduction Act adds significant funding for methane sensor research. 

      Other research at the Plata Lab includes the development of nanomaterials and heterogeneous catalysis techniques for environmental applications. The lab also explores mitigation solutions for industrial waste, particularly those related to the energy transition. Plata is the co-founder of an lithium-ion battery recycling startup called Nth Cycle. 

      On a more fundamental level, the Plata Lab is exploring how to develop products with environmental and social sustainability in mind. “Our overarching mission is to change the way that we invent materials and processes so that environmental objectives are incorporated along with traditional performance and cost metrics,” says Plata. “It is important to do that rigorous assessment early in the design process.”

      Play video

      MIT amps up methane research 

      The MIT Methane Network brings together 26 researchers from MIT along with representatives of other institutions “that are dedicated to the idea that we can reduce methane levels in our lifetime,” says Plata. The organization supports research such as Plata’s zeolite and sensor projects, as well as designing pipeline-fixing robots, developing methane-based fuels for clean hydrogen, and researching the capture and conversion of methane into liquid chemical precursors for pharmaceuticals and plastics. Other members are researching policies to encourage more sustainable agriculture and land use, as well as methane-related social justice initiatives. 

      “Methane is an especially difficult problem because it comes from all over the place,” says Plata. A recent Global Carbon Project study estimated that half of methane emissions are caused by humans. This is led by waste and agriculture (28 percent), including cow and sheep belching, rice paddies, and landfills.  

      Fossil fuels represent 18 percent of the total budget. Of this, about 63 percent is derived from oil and gas production and pipelines, 33 percent from coal mining activities, and 5 percent from industry and transportation. Human-caused biomass burning, primarily from slash-and-burn agriculture, emits about 4 percent of the global total.  

      The other half of the methane budget includes natural methane emissions from wetlands (20 percent) and other natural sources (30 percent). The latter includes permafrost melting and natural biomass burning, such as forest fires started by lightning.  

      With increases in global warming and population, the line between anthropogenic and natural causes is getting fuzzier. “Human activities are accelerating natural emissions,” says Plata. “Climate change increases the release of methane from wetlands and permafrost and leads to larger forest and peat fires.”  

      The calculations can get complicated. For example, wetlands provide benefits from CO2 capture, biological diversity, and sea level rise resiliency that more than compensate for methane releases. Meanwhile, draining swamps for development increases emissions. 

      Over 100 nations have signed onto the U.N.’s Global Methane Pledge to reduce at least 30 percent of anthropogenic emissions within the next 10 years. The U.N. report estimates that this goal can be achieved using proven technologies and that about 60 percent of these reductions can be accomplished at low cost. 

      Much of the savings would come from greater efficiencies in fossil fuel extraction, processing, and delivery. The methane fees in the Inflation Reduction Act are primarily focused on encouraging fossil fuel companies to accelerate ongoing efforts to cap old wells, flare off excess emissions, and tighten pipeline connections.  

      Fossil fuel companies have already made far greater pledges to reduce methane than they have with CO2, which is central to their business. This is due, in part, to the potential savings, as well as in preparation for methane regulations expected from the Environmental Protection Agency in late 2022. The regulations build upon existing EPA oversight of drilling operations, and will likely be exempt from the U.S. Supreme Court’s ruling that limits the federal government’s ability to regulate GHGs. 

      Zeolite filter targets methane in dairy and coal 

      The “low-hanging fruit” of gas stream mitigation addresses most of the 20 percent of total methane emissions in which the gas is released in sufficiently high concentrations for flaring. Plata’s zeolite filter aims to address the thornier challenge of reducing the 80 percent of non-flammable dilute emissions. 

      Plata found inspiration in decades-old catalysis research for turning methane into methanol. One strategy has been to use an abundant, low-cost aluminosilicate clay called zeolite.  

      “The methanol creation process is challenging because you need to separate a liquid, and it has very low efficiency,” says Plata. “Yet zeolite can be very efficient at converting methane into CO2, and it is much easier because it does not require liquid separation. Converting methane to CO2 sounds like a bad thing, but there is a major anti-warming benefit. And because methane is much more dilute than CO2, the relative CO2 contribution is minuscule.”  

      Using zeolite to create methanol requires highly concentrated methane, high temperatures and pressures, and industrial processing conditions. Yet Plata’s process, which dopes the zeolite with copper, operates in the presence of oxygen at much lower temperatures under typical pressures. “We let the methane proceed the way it wants from a thermodynamic perspective from methane to methanol down to CO2,” says Plata. 

      Researchers around the world are working on other dilute methane removal technologies. Projects include spraying iron salt aerosols into sea air where they react with natural chlorine or bromine radicals, thereby capturing methane. Most of these geoengineering solutions, however, are difficult to measure and would require massive scale to make a difference.  

      Plata is focusing her zeolite filters on environments where concentrations are high, but not so high as to be flammable. “We are trying to scale zeolite into filters that you could snap onto the side of a cross-ventilation fan in a dairy barn or in a ventilation air shaft in a coal mine,” says Plata. “For every packet of air we bring in, we take a lot of methane out, so we get more bang for our buck.”  

      The major challenge is creating a filter that can handle high flow rates without getting clogged or falling apart. Dairy barn air handlers can push air at up to 5,000 cubic feet per minute and coal mine handlers can approach 500,000 CFM. 

      Plata is exploring engineering options including fluidized bed reactors with floating catalyst particles. Another filter solution, based in part on catalytic converters, features “higher-order geometric structures where you have a porous material with a long path length where the gas can interact with the catalyst,” says Plata. “This avoids the challenge with fluidized beds of containing catalyst particles in the reactor. Instead, they are fixed within a structured material.”  

      Competing technologies for removing methane from mine shafts “operate at temperatures of 1,000 to 1,200 degrees C, requiring a lot of energy and risking explosion,” says Plata. “Our technology avoids safety concerns by operating at 300 to 400 degrees C. It reduces energy use and provides more tractable deployment costs.” 

      Potentially, energy and dollar costs could be further reduced in coal mines by capturing the heat generated by the conversion process. “In coal mines, you have enrichments above a half-percent methane, but below the 4 percent flammability threshold,” says Plata. “The excess heat from the process could be used to generate electricity using off-the-shelf converters.” 

      Plata’s dairy barn research is funded by the Gerstner Family Foundation and the coal mining project by the U.S. Department of Energy. “The DOE would like us to spin out the technology for scale-up within three years,” says Plata. “We cannot guarantee we will hit that goal, but we are trying to develop this as quickly as possible. Our society needs to start reducing methane emissions now.”  More

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      Coordinating climate and air-quality policies to improve public health

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      As America’s largest investment to fight climate change, the Inflation Reduction Act positions the country to reduce its greenhouse gas emissions by an estimated 40 percent below 2005 levels by 2030. But as it edges the United States closer to achieving its international climate commitment, the legislation is also expected to yield significant — and more immediate — improvements in the nation’s health. If successful in accelerating the transition from fossil fuels to clean energy alternatives, the IRA will sharply reduce atmospheric concentrations of fine particulates known to exacerbate respiratory and cardiovascular disease and cause premature deaths, along with other air pollutants that degrade human health. One recent study shows that eliminating air pollution from fossil fuels in the contiguous United States would prevent more than 50,000 premature deaths and avoid more than $600 billion in health costs each year.

      While national climate policies such as those advanced by the IRA can simultaneously help mitigate climate change and improve air quality, their results may vary widely when it comes to improving public health. That’s because the potential health benefits associated with air quality improvements are much greater in some regions and economic sectors than in others. Those benefits can be maximized, however, through a prudent combination of climate and air-quality policies.

      Several past studies have evaluated the likely health impacts of various policy combinations, but their usefulness has been limited due to a reliance on a small set of standard policy scenarios. More versatile tools are needed to model a wide range of climate and air-quality policy combinations and assess their collective effects on air quality and human health. Now researchers at the MIT Joint Program on the Science and Policy of Global Change and MIT Institute for Data, Systems and Society (IDSS) have developed a publicly available, flexible scenario tool that does just that.

      In a study published in the journal Geoscientific Model Development, the MIT team introduces its Tool for Air Pollution Scenarios (TAPS), which can be used to estimate the likely air-quality and health outcomes of a wide range of climate and air-quality policies at the regional, sectoral, and fuel-based level. 

      “This tool can help integrate the siloed sustainability issues of air pollution and climate action,” says the study’s lead author William Atkinson, who recently served as a Biogen Graduate Fellow and research assistant at the IDSS Technology and Policy Program’s (TPP) Research to Policy Engagement Initiative. “Climate action does not guarantee a clean air future, and vice versa — but the issues have similar sources that imply shared solutions if done right.”

      The study’s initial application of TAPS shows that with current air-quality policies and near-term Paris Agreement climate pledges alone, short-term pollution reductions give way to long-term increases — given the expected growth of emissions-intensive industrial and agricultural processes in developing regions. More ambitious climate and air-quality policies could be complementary, each reducing different pollutants substantially to give tremendous near- and long-term health benefits worldwide.

      “The significance of this work is that we can more confidently identify the long-term emission reduction strategies that also support air quality improvements,” says MIT Joint Program Deputy Director C. Adam Schlosser, a co-author of the study. “This is a win-win for setting climate targets that are also healthy targets.”

      TAPS projects air quality and health outcomes based on three integrated components: a recent global inventory of detailed emissions resulting from human activities (e.g., fossil fuel combustion, land-use change, industrial processes); multiple scenarios of emissions-generating human activities between now and the year 2100, produced by the MIT Economic Projection and Policy Analysis model; and emissions intensity (emissions per unit of activity) scenarios based on recent data from the Greenhouse Gas and Air Pollution Interactions and Synergies model.

      “We see the climate crisis as a health crisis, and believe that evidence-based approaches are key to making the most of this historic investment in the future, particularly for vulnerable communities,” says Johanna Jobin, global head of corporate reputation and responsibility at Biogen. “The scientific community has spoken with unanimity and alarm that not all climate-related actions deliver equal health benefits. We’re proud of our collaboration with the MIT Joint Program to develop this tool that can be used to bridge research-to-policy gaps, support policy decisions to promote health among vulnerable communities, and train the next generation of scientists and leaders for far-reaching impact.”

      The tool can inform decision-makers about a wide range of climate and air-quality policies. Policy scenarios can be applied to specific regions, sectors, or fuels to investigate policy combinations at a more granular level, or to target short-term actions with high-impact benefits.

      TAPS could be further developed to account for additional emissions sources and trends.

      “Our new tool could be used to examine a large range of both climate and air quality scenarios. As the framework is expanded, we can add detail for specific regions, as well as additional pollutants such as air toxics,” says study supervising co-author Noelle Selin, professor at IDSS and the MIT Department of Earth, Atmospheric and Planetary Sciences, and director of TPP.    

      This research was supported by the U.S. Environmental Protection Agency and its Science to Achieve Results (STAR) program; Biogen; TPP’s Leading Technology and Policy Initiative; and TPP’s Research to Policy Engagement Initiative. More

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      Ad hoc committee releases report on remote teaching best practices for on-campus education

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      The Ad Hoc Committee on Leveraging Best Practices from Remote Teaching for On-Campus Education has released a report that captures how instructors are weaving lessons learned from remote teaching into in-person classes. Despite the challenges imposed by teaching and learning remotely during the Covid-19 pandemic, the report says, “there were seeds planted then that, we hope, will bear fruit in the coming years.”

      “In the long run, one of the best things about having lived through our remote learning experience may be the intense and broad focus on pedagogy that it necessitated,” the report continues. “In a moment when nobody could just teach the way they had always done before, all of us had to go back to first principles and ask ourselves: What are our learning goals for our students? How can we best help them to achieve these goals?”

      The committee’s work is a direct response to one of the Refinement and Implementation Committees (RIC) formed as part of Task Force 2021 and Beyond. Led by co-chairs Krishna Rajagopal, the William A. M. Burden Professor of Physics, and Janet Rankin, director of the MIT Teaching + Learning Lab, the committee engaged with faculty and instructional staff, associate department heads, and undergraduate and graduate officers across MIT.

      The findings are distilled into four broad themes:

      Community, Well-being, and Belonging. Conversations revealed new ways that instructors cultivated these key interrelated concepts, all of which are fundamental to student learning and success. Many instructors focused more on supporting well-being and building community and belonging during the height of the pandemic precisely because the MIT community, and everyone in it, was under such great stress. Some of the resulting practices are continuing, the committee found. Examples include introducing simple gestures, such as start-of-class welcoming practices, and providing extensions and greater flexibility on student assignments. Also, many across MIT felt that the week-long Thanksgiving break offered in 2020 should become a permanent fixture in the academic calendar, because it enhances the well-being of both students and instructors at a time in the fall semester when everyone’s batteries need recharging. 
      Enhancing Engagement. The committee found a variety of practices that have enhanced engagement between students and instructors; among students; and among instructors. For example, many instructors have continued to offer some office hours on Zoom, which seems to reduce barriers to participation for many students, while offering in-person office hours for those who want to take advantage of opportunities for more open-ended conversations. Several departments increased their usage of undergraduate teaching assistants (UTAs) in ways that make students’ learning experience more engaging and give the UTAs a real teaching experience. In addition, many instructors are leveraging out-of-class communication spaces like Slack, Perusall, and Piazza so students can work together, ask questions, and share ideas. 
      Enriching and Augmenting the Learning Environment. The report presents two ways in which instructors have enhanced learning within the classroom: through blended learning and by incorporating authentic experiences. Although blended learning techniques are not new at MIT, after having made it through remote teaching many faculty have found new ways to combine synchronous in-person teaching with asynchronous activities for on-campus students, such as pre-class or pre-lab sequences of videos with exercises interspersed, take-home lab kits, auto-graded online problems that give students immediate feedback, and recorded lab experiences for subsequent review. In addition, instructors found many creative ways to make students’ learning more authentic by going on virtual field trips, using Zoom to bring experts from around the world into MIT classrooms or to enable interactions with students at other universities, and live-streaming experiments that students could not otherwise experience since they cannot be performed in a teaching lab.   
       Assessing Learning. For all its challenges, the report notes, remote teaching prompted instructors to take a step back and think about what they wanted students to learn, how to support it, and how to measure it. The committee found a variety of examples of alternatives to traditional assessments, such as papers or timed, written exams, that instructors tried during the pandemic and are continuing to use. These alternatives include shorter, more frequent, lower-stakes assessments; oral exams or debates; asynchronous, open-book/notes exams; virtual poster sessions; alternate grading schemes; and uploading paper psets and exams into Gradescope to use its logistics and rubrics to improve grading effectiveness and efficiency.
      A large portion of the report is devoted to an extensive, annotated list of best practices from remote instruction that are being used in the classroom. Interestingly, Rankin says, “so many of the strategies and practices developed and used during the pandemic are based on, and supported by, solid educational research.”

      The report concludes with one broad recommendation: that all faculty and instructors read the findings and experiment with some of the best practices in their own instruction. “Our hope is that the practices shared in the report will continue to be adopted, adapted, and expanded by members of the teaching community at MIT, and that instructors’ openness in sharing and learning from each will continue,” Rankin says.

      Two additional, specific recommendations are included in the report. First, the committee endorses the RIC 16 recommendation that a Classroom Advisory Board be created to provide strategic input grounded in evolving pedagogy about future classroom use and technology needs. In its conversations, the committee found a number of ways that remote teaching and learning have impacted students’ and instructors’ perceptions as they have returned to the classroom. For example, during the pandemic students benefited from being able to see everyone else’s faces on Zoom. As a result, some instructors would prefer classrooms that enable students to face each other, such as semi-circular classrooms instead of rectangular ones.

      More generally, the committee concluded, MIT needs classrooms with seats and tables that can be quickly and flexibly reconfigured to facilitate varying pedagogical objectives. The Classroom Advisory Board could also examine classroom technology; this includes the role of videoconferencing to create authentic engagement between MIT students and people far from campus, and blended learning that allows students to experience more of the in-classroom engagement with their peers and instructors from which the “magic of MIT” originates.

      Second, the committee recommends that an implementation group be formed to investigate the possibility of changing the MIT academic calendar to create a one-week break over Thanksgiving. “Finalizing an implementation plan will require careful consideration of various significant logistical challenges,” the report says. “However, the resulting gains to both well-being and learning from this change to the fall calendar make doing so worthwhile.”

      Rankin notes that the report findings dovetail with the recently released MIT Strategic Action Plan for Belonging, Achievement and Composition. “I believe that one of the most important things that became really apparent during remote teaching was that community, inclusion, and belonging really matter and are necessary for both learning and teaching, and that instructors can and should play a central role in creating structures and processes to support them in their classrooms and other learning environments,” she says.

      Rajagopal finds it inspiring that “during a time of intense stress — that nobody ever wants to relive — there was such an intense focus on how we teach and how our students learn that, today, in essentially every direction we look we see colleagues improving on-campus education for tomorrow. I hope that the report will help instructors across the Institute, and perhaps elsewhere, learn from each other. Its readers will see, as our committee did, new ways in which students and instructors are finding those moments, those interactions, where the magic of MIT is created.”

      In addition to the report, the co-chairs recommend two other valuable remote teaching resources: a video interview series, TLL’s Fresh Perspectives, and Open Learning’s collection of examples of how MIT faculty and instructors leveraged digital technology to support and transform teaching and learning during the heart of the pandemic. More

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      Four from MIT receive NIH New Innovator Awards for 2022

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      The National Institutes of Health (NIH) has awarded grants to four MIT faculty members as part of its High-Risk, High-Reward Research program.

      The program supports unconventional approaches to challenges in biomedical, behavioral, and social sciences. Each year, NIH Director’s Awards are granted to program applicants who propose high-risk, high-impact research in areas relevant to the NIH’s mission. In doing so, the NIH encourages innovative proposals that, due to their inherent risk, might struggle in the traditional peer-review process.

      This year, Lindsay Case, Siniša Hrvatin, Deblina Sarkar, and Caroline Uhler have been chosen to receive the New Innovator Award, which funds exceptionally creative research from early-career investigators. The award, which was established in 2007, supports researchers who are within 10 years of their final degree or clinical residency and have not yet received a research project grant or equivalent NIH grant.

      Lindsay Case, the Irwin and Helen Sizer Department of Biology Career Development Professor and an extramural member of the Koch Institute for Integrative Cancer Research, uses biochemistry and cell biology to study the spatial organization of signal transduction. Her work focuses on understanding how signaling molecules assemble into compartments with unique biochemical and biophysical properties to enable cells to sense and respond to information in their environment. Earlier this year, Case was one of two MIT assistant professors named as Searle Scholars.

      Siniša Hrvatin, who joined the School of Science faculty this past winter, is an assistant professor in the Department of Biology and a core member at the Whitehead Institute for Biomedical Research. He studies how animals and cells enter, regulate, and survive states of dormancy such as torpor and hibernation, aiming to harness the potential of these states therapeutically.

      Deblina Sarkar is an assistant professor and AT&T Career Development Chair Professor at the MIT Media Lab​. Her research combines the interdisciplinary fields of nanoelectronics, applied physics, and biology to invent disruptive technologies for energy-efficient nanoelectronics and merge such next-generation technologies with living matter to create a new paradigm for life-machine symbiosis. Her high-risk, high-reward proposal received the rare perfect impact score of 10, which is the highest score awarded by NIH.

      Caroline Uhler is a professor in the Department of Electrical Engineering and Computer Science and the Institute for Data, Systems, and Society. In addition, she is a core institute member at the Broad Institute of MIT and Harvard, where she co-directs the Eric and Wendy Schmidt Center. By combining machine learning, statistics, and genomics, she develops representation learning and causal inference methods to elucidate gene regulation in health and disease.

      The High-Risk, High-Reward Research program is supported by the NIH Common Fund, which oversees programs that pursue major opportunities and gaps in biomedical research that require collaboration across NIH Institutes and Centers. In addition to the New Innovator Award, the NIH also issues three other awards each year: the Pioneer Award, which supports bold and innovative research projects with unusually broad scientific impact; the Transformative Research Award, which supports risky and untested projects with transformative potential; and the Early Independence Award, which allows especially impressive junior scientists to skip the traditional postdoctoral training program to launch independent research careers.

      This year, the High-Risk, High-Reward Research program is awarding 103 awards, including eight Pioneer Awards, 72 New Innovator Awards, nine Transformative Research Awards, and 14 Early Independence Awards. These 103 awards total approximately $285 million in support from the institutes, centers, and offices across NIH over five years. “The science advanced by these researchers is poised to blaze new paths of discovery in human health,” says Lawrence A. Tabak DDS, PhD, who is performing the duties of the director of NIH. “This unique cohort of scientists will transform what is known in the biological and behavioral world. We are privileged to support this innovative science.” More

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      Computing for the health of the planet

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      The health of the planet is one of the most important challenges facing humankind today. From climate change to unsafe levels of air and water pollution to coastal and agricultural land erosion, a number of serious challenges threaten human and ecosystem health.

      Ensuring the health and safety of our planet necessitates approaches that connect scientific, engineering, social, economic, and political aspects. New computational methods can play a critical role by providing data-driven models and solutions for cleaner air, usable water, resilient food, efficient transportation systems, better-preserved biodiversity, and sustainable sources of energy.

      The MIT Schwarzman College of Computing is committed to hiring multiple new faculty in computing for climate and the environment, as part of MIT’s plan to recruit 20 climate-focused faculty under its climate action plan. This year the college undertook searches with several departments in the schools of Engineering and Science for shared faculty in computing for health of the planet, one of the six strategic areas of inquiry identified in an MIT-wide planning process to help focus shared hiring efforts. The college also undertook searches for core computing faculty in the Department of Electrical Engineering and Computer Science (EECS).

      The searches are part of an ongoing effort by the MIT Schwarzman College of Computing to hire 50 new faculty — 25 shared with other academic departments and 25 in computer science and artificial intelligence and decision-making. The goal is to build capacity at MIT to help more deeply infuse computing and other disciplines in departments.

      Four interdisciplinary scholars were hired in these searches. They will join the MIT faculty in the coming year to engage in research and teaching that will advance physical understanding of low-carbon energy solutions, Earth-climate modeling, biodiversity monitoring and conservation, and agricultural management through high-performance computing, transformational numerical methods, and machine-learning techniques.

      “By coordinating hiring efforts with multiple departments and schools, we were able to attract a cohort of exceptional scholars in this area to MIT. Each of them is developing and using advanced computational methods and tools to help find solutions for a range of climate and environmental issues,” says Daniel Huttenlocher, dean of the MIT Schwarzman College of Computing and the Henry Warren Ellis Professor of Electrical Engineering and Computer Science. “They will also help strengthen cross-departmental ties in computing across an important, critical area for MIT and the world.”

      “These strategic hires in the area of computing for climate and the environment are an incredible opportunity for the college to deepen its academic offerings and create new opportunity for collaboration across MIT,” says Anantha P. Chandrakasan, dean of the MIT School of Engineering and the Vannevar Bush Professor of Electrical Engineering and Computer Science. “The college plays a pivotal role in MIT’s overarching effort to hire climate-focused faculty — introducing the critical role of computing to address the health of the planet through innovative research and curriculum.”

      The four new faculty members are:

      Sara Beery will join MIT as an assistant professor in the Faculty of Artificial Intelligence and Decision-Making in EECS in September 2023. Beery received her PhD in computing and mathematical sciences at Caltech in 2022, where she was advised by Pietro Perona. Her research focuses on building computer vision methods that enable global-scale environmental and biodiversity monitoring across data modalities, tackling real-world challenges including strong spatiotemporal correlations, imperfect data quality, fine-grained categories, and long-tailed distributions. She partners with nongovernmental organizations and government agencies to deploy her methods in the wild worldwide and works toward increasing the diversity and accessibility of academic research in artificial intelligence through interdisciplinary capacity building and education.

      Priya Donti will join MIT as an assistant professor in the faculties of Electrical Engineering and Artificial Intelligence and Decision-Making in EECS in academic year 2023-24. Donti recently finished her PhD in the Computer Science Department and the Department of Engineering and Public Policy at Carnegie Mellon University, co-advised by Zico Kolter and Inês Azevedo. Her work focuses on machine learning for forecasting, optimization, and control in high-renewables power grids. Specifically, her research explores methods to incorporate the physics and hard constraints associated with electric power systems into deep learning models. Donti is also co-founder and chair of Climate Change AI, a nonprofit initiative to catalyze impactful work at the intersection of climate change and machine learning that is currently running through the Cornell Tech Runway Startup Postdoc Program.

      Ericmoore Jossou will join MIT as an assistant professor in a shared position between the Department of Nuclear Science and Engineering and the faculty of electrical engineering in EECS in July 2023. He is currently an assistant scientist at the Brookhaven National Laboratory, a U.S. Department of Energy-affiliated lab that conducts research in nuclear and high energy physics, energy science and technology, environmental and bioscience, nanoscience, and national security. His research at MIT will focus on understanding the processing-structure-properties correlation of materials for nuclear energy applications through advanced experiments, multiscale simulations, and data science. Jossou obtained his PhD in mechanical engineering in 2019 from the University of Saskatchewan.

      Sherrie Wang will join MIT as an assistant professor in a shared position between the Department of Mechanical Engineering and the Institute for Data, Systems, and Society in academic year 2023-24. Wang is currently a Ciriacy-Wantrup Postdoctoral Fellow at the University of California at Berkeley, hosted by Solomon Hsiang and the Global Policy Lab. She develops machine learning for Earth observation data. Her primary application areas are improving agricultural management and forecasting climate phenomena. She obtained her PhD in computational and mathematical engineering from Stanford University in 2021, where she was advised by David Lobell. More

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      New leadership at MIT’s Center for Biomedical Innovation

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      As it continues in its mission to improve global health through the development and implementation of biomedical innovation, the MIT Center for Biomedical Innovation (CBI) today announced changes to its leadership team: Stacy Springs has been named executive director, and Professor Richard Braatz has joined as the center’s new associate faculty director.

      The change in leadership comes at a time of rapid development in new therapeutic modalities, growing concern over global access to biologic medicines and healthy food, and widespread interest in applying computational tools and multi-disciplinary approaches to address long-standing biomedical challenges.

      “This marks an exciting new chapter for the CBI,” says faculty director Anthony J. Sinskey, professor of biology, who cofounded CBI in 2005. “As I look back at almost 20 years of CBI history, I see an exponential growth in our activities, educational offerings, and impact.”

      The center’s collaborative research model accelerates innovation in biotechnology and biomedical research, drawing on the expertise of faculty and researchers in MIT’s schools of Engineering and Science, the MIT Schwarzman College of Computing, and the MIT Sloan School of Management.

      Springs steps into the role of executive director having previously served as senior director of programs for CBI and as executive director of CBI’s Biomanufacturing Program and its Consortium on Adventitious Agent Contamination in Biomanufacturing (CAACB). She succeeds Gigi Hirsch, who founded the NEW Drug Development ParadIGmS (NEWDIGS) Initiative at CBI in 2009. Hirsch and NEWDIGS have now moved to Tufts Medical Center, establishing a headquarters at the new Center for Biomedical System Design within the Institute for Clinical Research and Health Policy Studies there.

      Braatz, a chemical engineer whose work is informed by mathematical modeling and computational techniques, conducts research in process data analytics, design, and control of advanced manufacturing systems.

      “It’s been great to interact with faculty from across the Institute who have complementary expertise,” says Braatz, the Edwin R. Gilliland Professor in the Department of Chemical Engineering. “Participating in CBI’s workshops has led to fruitful partnerships with companies in tackling industry-wide challenges.”

      CBI is housed under the Institute for Data Systems and Society and, specifically, the Sociotechnical Systems Research Center in the MIT Schwarzman College of Computing. CBI is home to two biomanufacturing consortia: the CAACB and the Biomanufacturing Consortium (BioMAN). Through these precompetitive collaborations, CBI researchers work with biomanufacturers and regulators to advance shared interests in biomanufacturing.

      In addition, CBI researchers are engaged in several sponsored research programs focused on integrated continuous biomanufacturing capabilities for monoclonal antibodies and vaccines, analytical technologies to measure quality and safety attributes of a variety of biologics, including gene and cell therapies, and rapid-cycle development of virus-like particle vaccines for SARS-CoV-2.

      In another significant initiative, CBI researchers are applying data analytics strategies to biomanufacturing problems. “In our smart data analytics project, we are creating new decision support tools and algorithms for biomanufacturing process control and plant-level decision-making. Further, we are leveraging machine learning and natural language processing to improve post-market surveillance studies,” says Springs.

      CBI is also working on advanced manufacturing for cell and gene therapies, among other new modalities, and is a part of the Singapore-MIT Alliance for Research and Technology – Critical Analytics for Manufacturing Personalized-Medicine (SMART CAMP). SMART CAMP is an international research effort focused on developing the analytical tools and biological understanding of critical quality attributes that will enable the manufacture and delivery of improved cell therapies to patients.

      “This is a crucial time for biomanufacturing and for innovation across the health-care value chain. The collaborative efforts of MIT researchers and consortia members will drive fundamental discovery and inform much-needed progress in industry,” says MIT Vice President for Research Maria Zuber.

      “CBI has a track record of engaging with health-care ecosystem challenges. I am confident that under the new leadership, it will continue to inspire MIT, the United States, and the entire world to improve the health of all people,” adds Daniel Huttenlocher, dean of the MIT Schwarzman College of Computing. More

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      Using seismology for groundwater management

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      As climate change increases the number of extreme weather events, such as megadroughts, groundwater management is key for sustaining water supply. But current groundwater monitoring tools are either costly or insufficient for deeper aquifers, limiting our ability to monitor and practice sustainable management in populated areas.

      Now, a new paper published in Nature Communications bridges seismology and hydrology with a pilot application that uses seismometers as a cost-effective way to monitor and map groundwater fluctuations.

      “Our measurements are independent from and complementary to traditional observations,” says Shujuan Mao PhD ’21, lead author on the paper. “It provides a new way to dictate groundwater management and evaluate the impact of human activity on shaping underground hydrologic systems.”

      Mao, currently a Thompson Postdoctoral Fellow in the Geophysics department at Stanford University, conducted most of the research during her PhD in MIT’s Department of Earth, Atmospheric and Planetary Sciences (EAPS). Other contributors to the paper include EAPS department chair and Schlumberger Professor of Earth and Planetary Sciences Robert van der Hilst, as well as Michel Campillo and Albanne Lecointre from the Institut des Sciences de la Terre in France.

      While there are a few different methods currently used for measuring groundwater, they all come with notable drawbacks. Hydraulic heads, which drill through the ground and into the aquifers, are expensive and can only give limited information at the specific location they’re placed. Noninvasive techniques based on satellite- or airborne-sensing lack the sensitivity and resolution needed to observe deeper depths.

      Mao proposes using seismometers, which are instruments used to measure ground vibrations such as the waves produced by earthquakes. They can measure seismic velocity, which is the propagation speed of seismic waves. Seismic velocity measurements are unique to the mechanical state of rocks, or the ways rocks respond to their physical environment, and can tell us a lot about them.

      The idea of using seismic velocity to characterize property changes in rocks has long been used in laboratory-scale analysis, but only recently have scientists been able to measure it continuously in realistic-scale geological settings. For aquifer monitoring, Mao and her team associate the seismic velocity with the hydraulic property, or the water content, in the rocks.

      Seismic velocity measurements make use of ambient seismic fields, or background noise, recorded by seismometers. “The Earth’s surface is always vibrating, whether due to ocean waves, winds, or human activities,” she explains. “Most of the time those vibrations are really small and are considered ‘noise’ by traditional seismologists. But in recent years scientists have shown that the continuous noise records in fact contain a wealth of information about the properties and structures of the Earth’s interior.”

      To extract useful information from the noise records, Mao and her team used a technique called seismic interferometry, which analyzes wave interference to calculate the seismic velocity of the medium the waves pass through. For their pilot application, Mao and her team applied this analysis to basins in the Metropolitan Los Angeles region, an area suffering from worsening drought and a growing population.

      By doing this, Mao and her team were able to see how the aquifers changed physically over time at a high resolution. Their seismic velocity measurements verified measurements taken by hydraulic heads over the last 20 years, and the images matched very well with satellite data. They could also see differences in how the storage areas changed between counties in the area that used different water pumping practices, which is important for developing water management protocol.

      Mao also calls using the seismometers a “buy-one get-one free” deal, since seismometers are already in use for earthquake and tectonic studies not just across California, but worldwide, and could help “avoid the expensive cost of drilling and maintaining dedicated groundwater monitoring wells,” she says.

      Mao emphasizes that this study is just the beginning of exploring possible applications of seismic noise interferometry in this way. It can be used to monitor other near-surface systems, such as geothermal or volcanic systems, and Mao is currently applying it to oil and gas fields. But in places like California currently experiencing megadroughts, and who rely on groundwater for a large portion of their water needs, this kind of information is key for sustainable water management.

      “It’s really important, especially now, to characterize these changes in groundwater storage so that we can promote data-informed policymaking to help them thrive under increasing water stress,” she says.

      This study was funded, in part, by the European Research Council, with additional support from the Thompson Fellowship at Stanford University. More